ncbiplasmidblast

BLAST,GEOProfiles,ProteinClusters,IdenticalProteinGroups,SPARCLE.BioProject,BioSample,Assembly,dbVar,GeneticTestingRegistry,Host,ViralHost,2023年12月6日—TocomparetheselectednucleotidesequencetoanNCBInucleotidedatabase(blastn):.ClickTools→BlastSelectedDNA/RNA→Nucleotide ...,THENCBITaxonomydatabaseallowsbrowsingofthetaxonomytree,whichcontainsaclassificationoforganisms.,Primer-BLASTAtoolforfindin...

參考資訊如下
Taxonomy browser (plasmids)

BLAST, GEO Profiles, Protein Clusters, Identical Protein Groups, SPARCLE. BioProject, BioSample, Assembly, dbVar, Genetic Testing Registry, Host, Viral Host

Blast a Sequence

2023年12月6日 — To compare the selected nucleotide sequence to an NCBI nucleotide database (blastn):. Click Tools → Blast Selected DNA/RNA → Nucleotide ...

Taxonomy browser (Plasmid pI258)

THE NCBI Taxonomy database allows browsing of the taxonomy tree, which contains a classification of organisms.

Primer designing tool

Primer-BLAST A tool for finding specific primers. Finding primers specific to your PCR template (using Primer3 and BLAST). Retrieve recent results ...

Taxonomy browser (Plasmid NR79)

THE NCBI Taxonomy database allows browsing of the taxonomy tree, which contains a classification of organisms.

Taxonomy browser (Plasmid R1)

Plasmid R1. Taxonomy ID: 2482 (for references in articles please use NCBI:txid2482). current name. Plasmid R1. NCBI BLAST name: other sequences. Rank: species

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PLSDB: a resource of complete bacterial plasmids

由 V Galata 著作 · 2019 · 被引用 315 次 — The database provides a user-friendly and interactive overview of the plasmid sequences which can be filtered and searched by various parameters ...

Tips for Using BLAST to Verify Plasmids

2014年5月29日 — BLAST helps us compare the sequencing results of the plasmids in our repository with known reference sequences, such as full plasmid sequences ...

BLAST

The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to ...